The Genetic Architecture of Locomotor Behavior in Drosophila melanogaster

dc.contributor.advisorTrudy Mackay, Committee Chairen_US
dc.contributor.advisorBruce Weir, Committee Memberen_US
dc.contributor.advisorRobert Grossfeld, Committee Memberen_US
dc.contributor.advisorMichael Puruganan, Committee Memberen_US
dc.contributor.authorJordan, Katherine Wellsen_US
dc.date.accessioned2010-04-02T18:48:09Z
dc.date.available2010-04-02T18:48:09Z
dc.date.issued2006-12-20en_US
dc.degree.disciplineGeneticsen_US
dc.degree.leveldissertationen_US
dc.degree.namePhDen_US
dc.description.abstractLocomotion is an integral component of most animal behaviors: movement is required for localization of food and mates, escape from predators, defense of territory, and response to stress. Many human neurological diseases (e.g., Parkinson's Disease and Huntington's Disease) are associated with locomotor deficits. Locomotion is a complex behavior, with variation in nature attributable to the joint segregation of multiple interacting quantitative trait loci (QTLs), with effects that are sensitive to the environment. Thus, understanding the genetic architecture of locomotor behavior is important from the dual perspectives of evolutionary biology and human health. However, our current knowledge falls short of the level of detail with which we ultimately seek to describe variation in locomotor behavior. We used complementary approaches in the model system Drosophila melanogaster to identify genes affecting locomotion: QTL mapping, followed by linkage disequilbrium mapping and association testing; artificial selection to derive lines for transcriptome analysis using microarrays; and P-element insertional mutagenesis to confirm the microarray results. QTL mapping uncovered four regions that contribute to variation in locomotor reactivity (a component of locomotor behavior) between two lab stocks. Deficiency complementation mapping refined our large QTL into 12 smaller QTL, then complementation tests to mutations identified 13 positional candidate genes affecting locomotor reactivity, including Dopa decarboxylase (Ddc) and Catecholamines Up (Catsup). Linkage disequilibrium mapping in a natural population of 164 second chromosome substitution lines suggested polymorphisms at Ddc and Catsup were associated with naturally occurring genetic variation in locomotion. Another strategy to discover genes affecting complex behaviors is to combine artificial selection for divergent phenotypes with whole genome expression profiling. Artificial selection lines created from a genetically heterogeneous background were selected for 25 generations to derive replicate lines with divergent levels of locomotor reactivity. Transcription profiling identified nearly 1,800 probe sets that were differentially expressed between the selection lines. Functional tests of P-element mutations in ten differentially expressed genes confirmed seven novel candidate genes affecting locomotion. Many of the genes identified in this study have other functions in metabolism, nervous system development, and response to different stimuli, suggesting extensive pleiotropy among the genes affecting locomotor behavior.en_US
dc.identifier.otheretd-09182006-181328en_US
dc.identifier.urihttp://www.lib.ncsu.edu/resolver/1840.16/4175
dc.rightsI hereby certify that, if appropriate, I have obtained and attached hereto a written permission statement from the owner(s) of each third party copyrighted matter to be included in my thesis, dissertation, or project report, allowing distribution as specified below. I certify that the version I submitted is the same as that approved by my advisory committee. I hereby grant to NC State University or its agents the non-exclusive license to archive and make accessible, under the conditions specified below, my thesis, dissertation, or project report in whole or in part in all forms of media, now or hereafter known. I retain all other ownership rights to the copyright of the thesis, dissertation or project report. I also retain the right to use in future works (such as articles or books) all or part of this thesis, dissertation, or project report.en_US
dc.subjectQTL mappingen_US
dc.subjectgenetic architectureen_US
dc.subjectDrosophila melanogasteren_US
dc.subjectlocomotor behavioren_US
dc.subjecttranscriptome profilingen_US
dc.subjectLD mappingen_US
dc.titleThe Genetic Architecture of Locomotor Behavior in Drosophila melanogasteren_US

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