Characterizing MTBE Cometabolism and Propane Metabolism by Mycobacterium austroafricanum JOB5

dc.contributor.advisorJames Brown, Committee Memberen_US
dc.contributor.advisorJonathan Olson, Committee Memberen_US
dc.contributor.advisorSteven Peretti, Committee Memberen_US
dc.contributor.advisorMichael Hyman, Committee Chairen_US
dc.contributor.authorHouse, Alanen_US
dc.date.accessioned2010-04-02T18:30:31Z
dc.date.available2010-04-02T18:30:31Z
dc.date.issued2009-04-20en_US
dc.degree.disciplineMicrobiologyen_US
dc.degree.leveldissertationen_US
dc.degree.namePhDen_US
dc.description.abstractCharacterizing MTBE Cometabolism and Propane Metabolism by Mycobacterium austroafricanum JOB5. (Under the direction of Michael R. Hyman.) Cometabolic transformations are unable to support cell growth. This process is often catalyzed by, and superimposed upon, enzyme systems expressed to catalyze carbon- or energy-yielding reactions. Biodegradation of the gasoline additive methyl tertiary butyl ether (MTBE) is known to be superimposed upon a propane-oxidizing system in the aerobic bacterium Mycobacterium austroafricanum (vaccae) JOB5. Taking a whole-cell approach, we investigated the physiology of propane metabolism and MTBE cometabolism in this strain. Multiple major gasoline components are frequent co-contaminants with MTBE in the environment, and we determined the impacts of these hydrocarbons on the cometabolism of both MTBE and its commonly encountered metabolite, tertiary butyl alcohol (TBA). Most of the hydrocarbons tested supported cell growth and concurrent MTBE and TBA oxidation occurred without affecting final culture optical density. Results suggest hydrocarbon-grown cells simultaneously expressed more than one alkane-oxidizing enzyme system. Nuclear magnetic resonance spectroscopy (NMR) was used to study the pathway of MTBE oxidation in propane-grown cells of strain JOB5. We confirmed the existence of predicted intermediates, including a hemiacetal, formate and formaldehyde. Hydroxyisobutyraldehyde, a predicted intermediate in MTBE oxidation by some bacterial strains was not detected, despite attempts to promote its accumulation. As the pathway of MTBE oxidation progressed, the rate of daughter product oxidation decreased, which may be preventing MTBE-dependent cell growth in strain JOB5. Propane metabolism was examined using a series of growth experiments and substrate oxidation assays. We observed the simultaneous production, and later consumption of both 1- and 2-propanol during cell growth. This divergent oxidation of propane was apparently followed by the divergent oxidation of propionate and the divergent oxidation of acetone. Our results suggest at least two CO2-fixation steps are involved in propane metabolism in strain JOB5. Finally, we used NMR to contribute to several studies that characterized the pathway of (i) MTBE oxidation by Nitrosomonas europaea or (ii) bacterial oxidation of a fluorinated analog of TBA. The later study identified a compound that may serve as a tracer for TBA degradation in situ.en_US
dc.identifier.otheretd-03262009-145112en_US
dc.identifier.urihttp://www.lib.ncsu.edu/resolver/1840.16/3480
dc.rightsI hereby certify that, if appropriate, I have obtained and attached hereto a written permission statement from the owner(s) of each third party copyrighted matter to be included in my thesis, dis sertation, or project report, allowing distribution as specified below. I certify that the version I submitted is the same as that approved by my advisory committee. I hereby grant to NC State University or its agents the non-exclusive license to archive and make accessible, under the conditions specified below, my thesis, dissertation, or project report in whole or in part in all forms of media, now or hereafter known. I retain all other ownership rights to the copyright of the thesis, dissertation or project report. I also retain the right to use in future works (such as articles or books) all or part of this thesis, dissertation, or project report.en_US
dc.subjectMTBE cometabolismen_US
dc.subjectMycobacteriumen_US
dc.subjectmonooxygenaseen_US
dc.subjectpropane metabolismen_US
dc.subjectbiodegradationen_US
dc.subjectcometabolismen_US
dc.titleCharacterizing MTBE Cometabolism and Propane Metabolism by Mycobacterium austroafricanum JOB5en_US

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